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Doctorado

Bioinformática I. Bioquímica

Objetivos

After this course you should be able to:

     Use the EMBL-EBI search tool to access genome, protein and chemical data

     Perform and assess sequence searching against EMBL-EBI databases using a variety of tools such as BLAST and PSI-SEARCH and sequence alignments using tools such as Clustal Omega and MUSCLE.

     Access different data types available in the Ensembl/Ensembl Genomes genome browsers

 

     View and explore data in the Ensembl browser

Contenidos

During this course you will learn about:

  • Sequence search and alignment
  • Ensembl/Ensembl genome

Ponentes

Organisers:  Grace Mugumbate, Felipe Lombo Brugos, Emilio Alvarez Arregui

Admin support: Frank O’Donnell

Lecturers: 

Ben Moore  and Andrew Cowley

Staff from the EMBL-European Bioinformatics Institute.

Cambridge, Reino Unido.

Fecha 15 y 16 de Mayo de 2017

Lugar Aula N-33. Edif. Norte. Facultad de Formación del Profesorado y Educación, C/ Aniceto Sela s/n.

Hora 9:00 a 17:00 horas

Rama de conocimiento Bioquímica prioritariamente.

Dedicación 20 horas que se distribuyen en 15 horas presenciales (4 sesiones) más 5 horas online.

Metodología Exposiciones, actividades, asesoramiento interpares y docente.

Evaluación y acreditación Asistencia, participación y tarea práctica.

Precio 40 euros por persona.

Capacidad 30 personas.

Observaciones

 Temporalización: 

Time

Subject

Trainer

Day 1 – 15th May 2017

9:00

Welcome and Introduction

 

9:10 - 10:30

Introduction to EBI resources, EMBL-EBI search tool

Ben Moore

10:30 – 11:00

Tea and Coffee

 

11:00-12:30

Introduction to the Ensembl/Ensembl Genomes genome browsers

Ben Moore

12:30-13:30

Lunch

 

13:30-15:00

Ensembl Gene and Transcript Annotation

Ben Moore

15:00 – 15:30

Tea and coffee

 

15:30-17:00

Ensembl tools: BioMart and the VEP

Ben Moore

17:00

End of Day 1

 

Day 2 – 16th  May 2017

9:00 - 10:30

Introduction to Sequence searching

Andrew Cowley

10:30 - 11:00

Tea and coffee

 

11:00 -12:30

Sequence searching and alignments

Andrew Cowley

12:30 - 13:30

Lunch

 

13:30 -15:00

Sequence searching and alignments

Andrew Cowley

15:00-15:30

Tea and Coffee

 

15:30-17:00

Sequence searching and alignments

Andrew Cowley

17:00

End of Day 2

 

 

 

 

Enlaces rápidos

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